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1 to 10 of 81,590 Results
Apr 17, 2019 - PMB Metabolomics
Deborde, Catherine; Roch, Léa; Moing, Annick; Jacob, Daniel, 2019, "1D 1H-NMR profiling of 8 fleshy fruits (mixed-stage samples)", https://doi.org/10.15454/BQHGR9, Portail Data Inra, V1
1D 1H-NMR metabolomic profiling of 8 fleshy fruit species, including three herbaceous species, eggplant, pepper and cucumber, three tree species, apple, peach and clementine, and two vines, kiwifruit and grape. “stage-mixture sample”, dedicated to the identification of major solu...
Sep 26, 2018 - Omics Dataverse
Deborde, Catherine; Fontaine, Jean-Xavier; Molinié, Roland; Botana, Adolfo; Jacob, Daniel, 2018, "1D 1H-NMR profiling of wheat samples", https://doi.org/10.15454/ERCVZR, Portail Data Inra, V1
NMR metabolomic profiling of wheat samples recorded on three sites (JEOL400, Bruker 500 and Bruker 600 MHz) - To be used with NMRProcFlow (https://nmrprocflow.org)
Apr 9, 2019
Selka, Faiçal; Burguet, Jasmine; Blein, Thomas; Biot, Eric; Laufs, Patrick; Andrey, Philippe, 2019, "3D dynamic statistical atlasing of cellular parameters during leaf morphogenesis.", https://doi.org/10.15454/SJAQND, Portail Data INRAE, V1
The movie shows the dynamic reconstruction of the developmental trajectory of a leaf from a collection of fixed 3D samples at successive developmental stages. Averages of cell volumes measured on individual organs are mapped using false colors. The algorithmic reconstruction was...
Sep 26, 2019
Bonal, Raúl; Guichoux, Erwan; Delcamp, Adline; Laizet, Yec'han; Hampe, Arndt, 2019, "70 highly validated SNP markers for Quercus ilex", https://doi.org/10.15454/AOVOO2, Portail Data INRAE, V1
70 highly validated SNP markers for Quercus ilex developped from ddRAD-Seq data following Garcia et al., 2018. PCR primer sequences and single base extension primers for MassArray analysis are provided.
Apr 8, 2020
Villellas, Jesus; Martín-Forés, Irene; Mariette, Stéphanie; Massot, Marie; Guichoux, Erwan; Acuña Míguez, Belén; Hampe, Arndt; Valladares, Fernando, 2020, "76 highly validated SNP markers for Juniperus thurifera", https://doi.org/10.15454/TRFS3H, Portail Data INRAE, V1
76 highly validated SNP markers for Juniperus thurifera developped from ddRAD-Seq data following Garcia et al., 2018, except the SNP detection which was performed using discoSnp++ (http://colibread.inria.fr/software/discosnp/). PCR primer sequences and single base extension prime...
Jul 11, 2019 - Experimental - Observation - Simulation Dataverse
Gaudin, Valerie; Andrey, Philippe, 2019, "A collection of 3D images of Arabidopsis thaliana cell nuclei", https://doi.org/10.15454/1HSOIE, Portail Data Inra, V1
This dataset contains >200 images of nuclei from Arabidopsis thaliana plantlets. Nuclei were isolated and DAPI-stained prior to confocal imaging. See reference Andrey et al 2010 below for further details on sample preparation and imaging protocols. Following imaging, the images w...
May 21, 2019 - URGI Plant and Fungi Dataverse
Le Paslier, Marie-Christine; Choisne, Nathalie; Bacilieri, Roberto; Boursiquot, Jean-Michel; Bras, Marc; Brunel, Dominique; Chauveau, Aurélie; Hausmann, Ludger; Lacombe, Thierry; Laucou, Valérie; Launay, Amandine; Marchal, Cécile; Martinez-Zapater, José-Miguel; Berard, Aurélie; Quesneville, Hadi; Töpfer, Reinhard; Torres-Perez, Rafael; Adam-Blondon, Anne-Françoise, 2019, "A dataset of 9.896 single nuclear polymorphisms for 112 wild grapes, obtained with the GrapeReSeq 18K Vitis chip", https://doi.org/10.15454/9RUCEP, Portail Data Inra, V3
The dataset, comprising 9.896 SNPs for 112 wild grapes (Vitis vinifera subsp. sylvestris), is made available here in support of the paper : Ramos-Madrigal J, Wiborg Runge AK, Bouby L, Lacombe T, Samaniego-Castruita JA, Adam-Blondon AF, Figueiral I, Hallavant C, Martínez-Zapater J...
Nov 5, 2019 - URGI Plant and Fungi Dataverse
Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios", https://doi.org/10.15454/IASSTN, Portail Data Inra, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF]
This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east...
Nov 23, 2018 - URGI Plant and Fungi Dataverse
Canaguier, Aurélie; Grimplet, Jérôme; Scalabrin, Simone; Di Gaspero, Gabriele; Mohellibi, Nacer; Choisne, Nathalie; Rombault, Stéphane; Rustenholtz, Camille; Morgante, Michele; Quesneville, Hadi; Adam-Blondon, Anne-Françoise, 2018, "A new version of the grapevine reference genome assembly (12X.v2) and of its annotation (VCost.v3)", https://doi.org/10.15454/1.5009072354498936E12, Portail Data Inra, V3
Abstract:The dataset comprises 12X.v2 grapevine reference genome assembly and its VCost.v3 gene annotation in Genbank format. The 12X.v2 chromosome assembly is based on the scaffolds of the grapevine reference genome build (FN594950-FN597014, EMBL release 102; Vitis vinifera cv....
Feb 14, 2019
Andrianantenaina, Anjy Nandrianina; Rathgeber, Cyrille B. K.; Pérez-de-Lis, Gonzalo; Cuny, Henri; Ruelle, Julien, 2019, "A novel histologic approach to quantify the intra-annual dynamics of carbon sequestration in spruce forming wood", https://doi.org/10.15454/PINS1H, Portail Data INRAE, V1, UNF:6:mExKB5WfrTGbk9DrjPmioQ== [fileUNF]
The dataset is compoused of two main variables (xylem radial increment measured along three radial files M1-M2-M3, and cell wall proportion CWP measured in the forming xylem) needed in a novel histologic approach to estimate the intra-annual dynamics of stem radial growth and abo...
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