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1 to 10 of 27 Results
Unknown - 1.1 MB - MD5: ecb55ff2e7d19bece1549617ed777dc1
Cytoscape file
Unknown - 27.5 KB - MD5: 549eb8883cfa4c583e26681caf1677f6
R script of bioinformatic pipeline used on paired-end sequences joining with PEAR
Unknown - 6.1 KB - MD5: b8716f7b344a94a523e229ec69bc5065
R script used to compute the 3 matrices needed to run the HMSC models
Unknown - 27.4 KB - MD5: 9a71fda498b62c421f8c73bbbfdde039
R script used to run the HMSC models
Unknown - 53.7 KB - MD5: 631fe03be03a47ef7ab33d8e04339f82
R script performing PCoA, GLMs and PERMANOVA and formatting the HMSC model results
Unknown - 94.3 KB - MD5: 3558088a924104a0d5c00151471a0639
The global analysis workflow. Main file of the study.
Unknown - 771.1 KB - MD5: be1891e0f925554dfda7ab6f2582a84c
Cleaned TE-consensus sequences library (REPET analysis : TEannot + automated cleaning with 1 loose round of TEannot). Used for TE annotation.
Unknown - 5.2 MB - MD5: 3a6ecd1749e832475af20e4fb5fe377a
draft TE annotation (REPET output; gff3 format)
Unknown - 1.2 KB - MD5: 7dc495225549030ba39b271c079d7f22
TE annot pipeline configuration file with parameters values. Mandatory for TEdenovo pipeline execution. For more information, see : https://urgi.versailles.inra.fr/Tools/REPET https://urgi.versailles.inra.fr/Tools/REPET/TEannottuto
Unknown - 2.4 KB - MD5: 0f0907566230d6ad307cec197a96ab40
TE denovo pipeline configuration file with parameters values. Mandatory for TEdenovo pipeline execution. For more information, see : https://urgi.versailles.inra.fr/Tools/REPET https://urgi.versailles.inra.fr/Tools/REPET/TEdenovotuto
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