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Jan 10, 2020 - ThaliaDB maize Dataverse
Nicolas, Stephane; Negro, Sandra; Madur, Delphine; Clipet, Camille; Combes, Valérie; Bauland, Cyril; Tardieu, François; Charcosset, Alain; Moreau, Laurence, 2020, "Amaizing Dent Panel Genotyping Dataset (354 Public Lines)", https://doi.org/10.15454/GAHEU0, Portail Data INRAE, V1, UNF:6:xDkI2MetKCmc6/d1u04ZkA== [fileUNF]
Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops panel" assembled in the frame of F7P European projects DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 de...
Tab-Delimited - 53.9 KB - MD5: 3e62a05f2b8a775f13a2a7a7198eb02b
This table (354 rows x 10 columns) describes the 354 accessions genotyped by three technologies in genotyping matrix. 10 columns indicates variety name (Variety_ID), accession name (Accession_ID), breeder that obtained inbred lines (Breeder), institution that provided initial see...
Tab-Delimited - 54.9 MB - MD5: 94b810f814c543253133445d3ca13f8e
This table (978,134 rows x 8 columns) describes the 973,134 loci genotyped by one of three technologies on 354 accessions. Columns indicates the name of SNP (SNP.name), position of each loci on chromosome (Chromosome) and along each chromosomes in base pairs (Position) according...
Tab-Separated Values - 671.9 MB - MD5: db08c38de1cff98c135ef3408e10dd79
Genotyping matrix with inbred lines in row and markers in columns (354 rows x 978,135 columns). The first columns indicates the variety name. The header of genotyping matrix indicates names of markers. Genotyping data matrix were coded in allelic dose (0,1,2) and all markers is...
Jan 13, 2020 - URGI Plant and Fungi Dataverse
Castelletti, Sara* (equal contribution); Coupel-Ledru, Aude* (equal contribution); Correia-Granato, Italo; Palaffre, Carine; Cabrera-Bosquet, Llorenç; Tonelli, Chiara; Nicolas, Stéphane; Tardieu, François; Welcker, Claude; Conti, Lucio, 2020, "Flowering-related traits and florigen expression in a collection of maize inbred lines", https://doi.org/10.15454/XTHN7I, Portail Data INRAE, V1, UNF:6:wVg54W5AlhQ3d8cmAt/XoQ== [fileUNF]
This dataset comes from a collection of 354 maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 inbred lines from "Drops panel" assembled in the frame of F7P European project DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 dent lines...
Adobe PDF - 318.9 KB - MD5: 8da6cbff1dc1ec625e1d4ecfe8809e91
This file contains the outline of the organization and contents of the files. It describes the different measurement scales available: Phenotypic data at the plot level in each field experiment (1a) and at the genotypic level in each field experiment and for both field experime...
Tab-Delimited - 88.7 KB - MD5: 6eddc34c0d9b2a6bae21a0d5089d2932
This file contains the raw phenotypic data per experiment in each field experiment (respectively 2015 and 2016, in Saint Martin de Hynx INRA experimental station, 43°N, 553 1.3°W, France): one value per individual plot, and outliers have been removed. It contains six columns of i...
Tab-Delimited - 71.7 KB - MD5: 3d6b6585746026163a327c61146d1101
This file contains the genotypic means (Best Linear Unbiased Estimation, BLUEs), with one value per experiment (year) per genotype, for flowering-related traits in the field. It contains two columns of identification of experiments and genotypes. «Experiment»: experiments ID desc...
Tab-Delimited - 303.1 KB - MD5: d1208dc2684d9f9f492a27db8eddddc4
This file contains the raw florigen expression data per experiment (year): one value per individual plant, and outliers have been removed. It contains ten columns for identifying the experiment, the genotypes and metadata. In «Experiment», experiments are described by the platfor...
Tab-Delimited - 72.7 KB - MD5: 1a413d2121a0221e6d10657d3afd1466
This file contains the genotypic means (Best Linear Unbiased Estimation, BLUEs), with one value per experiment (year) per genotype, for the expression of the florigens in the platform. It contains two columns of identification of experiments and genotypes: «Experiment»: experimen...
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