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1 to 10 of 13 Results
May 29, 2020 - Experimental - Observation - Simulation Dataverse
Bénard, Camille; Biais, Benoit; Ballias, Patricia; Beauvoit, Bertrand; Bernillon, Stéphane; Cabasson, Cécile; Colombié, Sophie; Deborde, Catherine; Gaillard, Pierre; Génard, Michel; Gibon, Yves; Jacob, Daniel; Maucourt, Mickael; Moing, Annick; Vercambre, Gilles, 2018, "FRIM - Fruit Integrative Modelling", https://doi.org/10.15454/95JUTK, Portail Data INRAE, V4
The project aimed to build a virtual tomato fruit that enables the prediction of metabolite levels given genetic and environmental inputs, by an iterative process between laboratories which combine expertise in fruit biology, ecophysiology, theoretical and experimental biochemist...
Feb 10, 2020 - URGI Plant and Fungi Dataverse
Guillaumie, Sabine; Decroocq, Stéphane; Ollat, Nathalie; Delrot, Serge; Gomès, Eric; Cookson, Sarah, 2020, "Dissecting the control of shoot development in grapevine: genetics and genomics identify potential regulators", https://doi.org/10.15454/4ZUPCP, Portail Data INRAE, V1
A F2 population consisting of 337 individuals was derived from the inter-specific cross of V. vinifera cv. Cabernet-Sauvignon (CS) x V. riparia cv. Riparia Gloire de Montpellier (RGM). This population, named CS x RGM_F2, resulted from the self-fertilization of the F1_148 individu...
Feb 7, 2020 - ThaliaDB maize Dataverse
Rio Simon, 2020, "FlintDent GWAS dataset", https://doi.org/10.15454/OQT5CY, Portail Data INRAE, V1
This dataset corresponds to the data associated with the study: "Disentangling group specific QTL allele effects from genetic background epistasis in GWAS: an application to maize flowering" by Rio et al. (2019). The data includes genotypic and phenotypic information for a panel...
Jan 10, 2020 - ThaliaDB maize Dataverse
Nicolas, Stephane; Negro, Sandra; Madur, Delphine; Clipet, Camille; Combes, Valérie; Bauland, Cyril; Tardieu, François; Charcosset, Alain; Moreau, Laurence, 2020, "Amaizing Dent Panel Genotyping Dataset (354 Public Lines)", https://doi.org/10.15454/GAHEU0, Portail Data INRAE, V1, UNF:6:xDkI2MetKCmc6/d1u04ZkA== [fileUNF]
Genotyping matrix of a collection of 354 dent maize inbred lines corresponding to the "Public Amaizing Dent Panel". This panel includes: (i) 254 dent inbred lines from "Drops panel" assembled in the frame of F7P European projects DROPs (FP7-244374, PI: F. Tardieu) and (ii) 100 de...
Nov 5, 2019 - URGI Plant and Fungi Dataverse
Millet, Emilie J.; Pommier, Cyril; Buy, Mélanie; Nagel, Axel; Kruijer, Willem; Welz-Bolduan, Therese; Lopez, Jeremy; Richard, Cécile; Racz, Ferenc; Tanzi, Franco; Spitkot, Tamas; Canè, Maria-Angela; Negro, Sandra S.; Coupel-Ledru, Aude; Nicolas, Stéphane D.; Palaffre, Carine; Bauland, Cyril; Praud, Sébastien; Ranc, Nicolas; Presterl, Thomas; Bedo, Zoltan; Tuberosa, Roberto; Usadel, Björn; Charcosset, Alain; van Eeuwijk, Fred A.; Draye, Xavier; Tardieu, François; Welcker, Claude, 2019, "A multi-site experiment in a network of European fields for assessing the maize yield response to environmental scenarios", https://doi.org/10.15454/IASSTN, Portail Data Inra, V2, UNF:6:zF9w0A2f+MHeW7maeeXJWA== [fileUNF]
This dataset comes from the European Union project DROPS (DROught-tolerant yielding PlantS). A panel of 256 maize hybrids was grown with two water regimes (irrigated or rainfed), in seven fields in 2012 and 2013, respectively, spread along a climatic transect from western to east...
Oct 22, 2019 - URGI Plant and Fungi Dataverse
Denancé, Caroline; Muranty, Hélène; Durel, Charles-Eric, 2019, "FruitBreedomics apple high-density SNP genotyping dataset", https://doi.org/10.15454/IOPGYF, Portail Data Inra, V1, UNF:6:/G46p8X/l1N8sBErAjUP2g== [fileUNF]
This dataset corresponds to the elaborate genotyping matrix after filtering published by Muranty et al (2019) in BMC Plant Biology: "Using whole-genome SNP data to reconstruct a large multi-generation pedigree in apple germplasm". The dataset was obtained by using the Axiom®Apple...
Oct 22, 2019 - URGI Plant and Fungi Dataverse
Bernard, Anthony, 2019, "INRA's Walnut Hapmap", https://doi.org/10.15454/XPKII8, Portail Data Inra, V1, UNF:6:4bN4PEDOfprjfjm7rDovIg== [fileUNF]
Persian or English walnut (Juglans regia L.), the walnut species cultivated for nut production, is one of the oldest food sources known and is grown worldwide in temperate areas. In this work, SNP genotyping has been done using the Axiom 700K J. regia SNP array, for 170 accession...
Sep 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stephane; Joet, Johann; Duarte Jorge; Pichon, Jean-Philippe; Pirani, Ali; Vitte, Clémentine; Riviere, Nathalie; Mabire, 2019, "CNVMaize Indels Affymetrix Axiom Array", https://doi.org/10.15454/DWB4UT, Portail Data Inra, V1
These three datasets describe the content of Indel Affymetrix Axiom array corresponding to the publication "High throughput genotyping of structural variations in a complex plant genome using an original Affymetrix® Axiom® array " of Mabire, Duarte et al., 2019. The Affymetrix Ax...
Jul 26, 2019
Lagrée Marie, 2019, "Impact of oxidative stress (H2O2) on Pseudomonas Graminis - NMR dataset", https://doi.org/10.15454/Q7VKT5, Portail Data Inra, V2
Impact of atmospheric stresses on clouds microorganisms metabolism: the case of H2O2 : The dataset contains 32 files created from 500MHz NMR spectrometer and cdf files created from LC-MS system:62 samples and 9 CQP (pools) injected in positive ionization mode and 64 samples and 1...
Jun 17, 2019 - ThaliaDB maize Dataverse
Nicolas, Stéphane; Madur, Delphine; Negro, Sandra; Combes, Valérie; Bauland, Cyril; Tardieu, François; Millet, Emilie; Welcker, Claude; Charcosset, Alain, 2019, "DROPS maize genotyping elaborate dataset", https://doi.org/10.15454/AEC4BN, Portail Data Inra, V1
These three dataset correspond to three elaborate genotyping matrix after filtering and imputation published by Negro et al., (2019) in BMC Plant Biology: "Genotyping-by-sequencing and SNP arrays are complementary for detecting quantitative trait loci by tagging different haploty...
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